Stereo-seq spatial transcriptomics
High resolution and large image area spatial RNA-seq
High resolution and large image area spatial RNA-seq
500 nm spot distance for unprecedented resolution and single-cell segmentation.
Scalable to your experimental needs from 5mm x 5mm scale to large capture areas of up to 132mm x 132mm.
Solutions are available for fresh frozen, fixed frozen and FFPE tissue.
Species agnostic capture of 3' ends of PolyA+ RNA (fresh frozen) or total RNA (FFPE).
Integration with immunofluorescence staining and CITE-seq proteomics is supported.
Our Spatial Transcriptomics service enables high-resolution spatial gene expression analysis using fresh frozen tissue and FFPE sections on specialized chip slides. This technology preserves tissue architecture, allowing precise molecular studies. Offered in partnership with STOmics, a leader in spatial multi-omics, this service provides whole-transcriptome analysis subcellular precision and a large field of view.
STOmics Stereo-seq chips are available for FFPE and Fresh Frozen samples.
Our Spatial Transcriptomics service is always paired with high-throughput sequencing on the DNBSEQ platform as well as primary data analysis.
Stereo-seq is a cutting-edge technology for studying gene expression patterns within intact tissue sections.
The high-resolution spatial data enables researchers to explore cellular microenvironments, tissue architecture, and molecular interactions with unprecedented precision.
Feel free to contact us to find out how we can help with your current project. You can also submit a request for a quote.
Contact UsDocuments, publications etc.
| Customer Publications | ||
|---|---|---|
| Moura et al. 2024 | Erythroid Differentiation Enhances RNA Mis-Splicing in SF3B1-Mutant Myelodysplastic Syndromes with Ring Sideroblasts | |
| Papanicolaou et al. 2024 | Multi-layered dosage compensation of the avian Z chromosome | Download |
| Papanicolaou et al. 2025 | Dosage responses of aneuploid autosomal chromosomes | Download |
| Public Datasets | ||
|---|---|---|
| Parse Demo Data | Coming Soon: Parse Evercode WT v3 Mini data from ~5,000 human PBMCs. | |
| ATAC-seq Demo Data | Coming Soon: ATAC-seq data from 50,000 HEK293T cells. |
| Frequently Asked Questions | ||
|---|---|---|
| Xpress-seq FAQs | FAQs regarding Xpress-seq plate-based scRNA-seq. | Download |
| Xpress-seq Data Description | Description of data formats and results files for single-cell Xpress-seq. | Download |
| Bulk Xpress-seq Data | Description of data formats and results files for bulk Xpress-seq. | Download |
| Data Download Guide | Our Guide for Downloading Project Data. | Download |
| Sample requirements and guidelines for our Services | ||
|---|---|---|
| Bulk RNA-seq Specs | Sample preparation and requirements for bulk RNA-seq. | Download |
| Library Submission Specs | Sample requirements for ready-made library sequencing. | Download |
| ATAC-seq Sample Prep Guide | Instructions for preparing samples for ATAC-seq service. | Download |
| Parse Evercode Sample Prep Guide | Instructions for preparing samples for Parse scRNA-seq service. | Download |
| Related to Xpress-seq Service | ||
|---|---|---|
| FACS sorting SOP for Xpress-seq plates. | Ensure optimal outcomes for Xpress-seq experiments with our guide to FACS sorting. | Download |
| Xpress-seq lysis plate guide | Find out how to obtain and handle Xpress-seq lysis plates in this guide. | Download |
| Xpress-seq QC Information | Our guide to interpreting Xpress-seq plate QC results. | Download |
| Xpress-seq Data Description | Description of data formats and results files. | Download |
| Xpress-seq Plate Submission Sheet | For your next Xpress-seq order. | Download |
| Xpress-seq Deliverables | Specific terms and conditions for Xpress-seq service. | Download |
| For our Services | ||
|---|---|---|
| Sequencing Submission Sheet | For your next ready-made library sequencing order. | Download |
| Xpress-seq Plate Submission Sheet | For your next Xpress-seq order. | Download |
| Parse Submission Sheet | For your next Parse Biosciences order. | Download |
| SeekGene Submission Sheet | For your next SeekGene order. | Download |
| Bulk RNA-seq Submission Sheet | For your next bulk RNA-seq order. | Download |
| Pixelgen Submission Sheet | For your next Pixelgen order. | Download |
| Olink Reveal Submission Sheet | For your next Olink order. | Download |
| DNA Sequencing Submission Sheet | For your next DNA sequencing order. | Download |
Xpress Genomics was founded in
2022 in Stockholm (Sweden) based on
our in-house technology for scalable
full-length single-cell RNA-seq.
Cancer Centrum Karolinska,
Visionsgatan 56, 171 64 Solna, Sweden
© Xpress Genomics, Stockholm, Sweden. 2025
